Materials
Overview
On this page you will find information about the plasmids, strains, primers and DNA sequences we used. For the kits used for our experiments, the references are indicated on the protocol page.
Plasmids
pET21 b (+) :
atccggatatagttcctcctttcagcaaaaaacccctcaagacccgtttagaggccccaaggggttatgctagttattgctcagcggtggcagcagccaactcagcttcctttcgggctttgttagcagccggatctcagtggtggtggtggtggtgctcgagtgcggccgcaagcttgtcgacggagctcgaattcggatcccgacccatttgctgtccaccagtcatgctagccatatgtatatctccttcttaaagttaaacaaaattatttctagaggggaattgttatccgctcacaattcccctatagtgagtcgtattaatttcgcgggatcgagatctcgatcctctacgccggacgcatcgtggccggcatcaccggcgccacaggtgcggttgctggcgcctatatcgccgacatcaccgatggggaagatcgggctcgccacttcgggctcatgagcgcttgtttcggcgtgggtatggtggcaggccccgtggccgggggactgttgggcgccatctccttgcatgcaccattccttgcggcggcggtgctcaacggcctcaacctactactgggctgcttcctaatgcaggagtcgcataagggagagcgtcgagatcccggacaccatcgaatggcgcaaaacctttcgcggtatggcatgatagcgcccggaagagagtcaattcagggtggtgaatgtgaaaccagtaacgttatacgatgtcgcagagtatgccggtgtctcttatcagaccgtttcccgcgtggtgaaccaggccagccacgtttctgcgaaaacgcgggaaaaagtggaagcggcgatggcggagctgaattacattcccaaccgcgtggcacaacaactggcgggcaaacagtcgttgctgattggcgttgccacctccagtctggccctgcacgcgccgtcgcaaattgtcgcggcgattaaatctcgcgccgatcaactgggtgccagcgtggtggtgtcgatggtagaacgaagcggcgtcgaagcctgtaaagcggcggtgcacaatcttctcgcgcaacgcgtcagtgggctgatcattaactatccgctggatgaccaggatgccattgctgtggaagctgcctgcactaatgttccggcgttatttcttgatgtctctgaccagacacccatcaacagtattattttctcccatgaagacggtacgcgactgggcgtggagcatctggtcgcattgggtcaccagcaaatcgcgctgttagcgggcccattaagttctgtctcggcgcgtctgcgtctggctggctggcataaatatctcactcgcaatcaaattcagccgatagcggaacgggaaggcgactggagtgccatgtccggttttcaacaaaccatgcaaatgctgaatgagggcatcgttcccactgcgatgctggttgccaacgatcagatggcgctgggcgcaatgcgcgccattaccgagtccgggctgcgcgttggtgcggatatctcggtagtgggatacgacgataccgaagacagctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgctggggcaaaccagcgtggaccgcttgctgcaactctctcagggccaggcggtgaagggcaatcagctgttgcccgtctcactggtgaaaagaaaaaccaccctggcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtaagttagctcactcattaggcaccgggatctcgaccgatgcccttgagagccttcaacccagtcagctccttccggtgggcgcggggcatgactatcgtcgccgcacttatgactgtcttctttatcatgcaactcgtaggacaggtgccggcagcgctctgggtcattttcggcgaggaccgctttcgctggagcgcgacgatgatcggcctgtcgcttgcggtattcggaatcttgcacgccctcgctcaagccttcgtcactggtcccgccaccaaacgtttcggcgagaagcaggccattatcgccggcatggcggccccacgggtgcgcatgatcgtgctcctgtcgttgaggacccggctaggctggcggggttgccttactggttagcagaatgaatcaccgatacgcgagcgaacgtgaagcgactgctgctgcaaaacgtctgcgacctgagcaacaacatgaatggtcttcggtttccgtgtttcgtaaagtctggaaacgcggaagtcagcgccctgcaccattatgttccggatctgcatcgcaggatgctgctggctaccctgtggaacacctacatctgtattaacgaagcgctggcattgaccctgagtgatttttctctggtcccgccgcatccataccgccagttgtttaccctcacaacgttccagtaaccgggcatgttcatcatcagtaacccgtatcgtgagcatcctctctcgtttcatcggtatcattacccccatgaacagaaatcccccttacacggaggcatcagtgaccaaacaggaaaaaaccgcccttaacatggcccgctttatcagaagccagacattaacgcttctggagaaactcaacgagctggacgcggatgaacaggcagacatctgtgaatcgcttcacgaccacgctgatgagctttaccgcagctgcctcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggtgttggcgggtgtcggggcgcagccatgacccagtcacgtagcgatagcggagtgtatactggcttaactatgcggcatcagagcagattgtactgagagtgcaccatatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcaggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgatacgggagggcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttgccattgctgcaggcatcgtggtgtcacgctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataataccgcgccacatagcagaactttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccccgaaaagtgccacctgaaattgtaaacgttaatattttgttaaaattcgcgttaaatttttgttaaatcagctcattttttaaccaataggccgaaatcggcaaaatcccttataaatcaaaagaatagaccgagatagggttgagtgttgttccagtttggaacaagagtccactattaaagaacgtggactccaacgtcaaagggcgaaaaaccgtctatcagggcgatggcccactacgtgaaccatcaccctaatcaagttttttggggtcgaggtgccgtaaagcactaaatcggaaccctaaagggagcccccgatttagagcttgacggggaaagccggcgaacgtggcgagaaaggaagggaagaaagcgaaaggagcgggcgctagggcgctggcaagtgtagcggtcacgctgcgcgtaaccaccacacccgccgcgcttaatgcgccgctacagggcgcgtcccattcgcca
Table 7 : Features of pET21 b (+)
Feature name | End | Start |
T7 terminator |
1 |
129 |
MCS |
230 |
307 |
T7 promoter |
308 |
326 |
pBR322_origin |
3210 |
3829 |
Ampicillin resistance gene |
3984 |
4844 |
psb1c3_double-inverse_ihfB800BFP_xylaRFP
cttccttagctcctgaaaatctcgataactcaaaaaatacgcccggtagtgatcttatttcattatggtgaaagttggaacctcttacgtgcccgatcaactcgagtgccacctgacgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggcagaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagattattaattcagtttatgacccagcttgctaggcaagtcgcaatagcgcgcgactgcaacctcgtgctgctccacgtaagtctcattattcgcttctttaatgcgttccagacggtagtcgacatagtaaacacccggcatcttcagatttttcgccggtttcttgctgcggtacgtcgtcttgatatttgcgatcaaatggctgccaccaaccagcttcagtgccatgtcgttacggccctccaggccaccatcggccggatacagggtttccgtaaacgcctcccaacccagggttttcttctgcatcaccggaccattgctcgtaaagttgacgccacgaattttcacgttatagatcagacagccatcttgcagggaggtatcttgggtggcggtcaacacaccaccatcttcatacgtggtgacacgctcccaggtgaaaccttccggaaagctctgtttgaagaaatccggaatgccctgagtatggttaatgaacgttttggaaccgtacaggaagctggtcgccagaatgtcaaaagcgaacggcagtggaccgccctccacaactttgatacgcatggtttgggtgccttcgtacggcttaccctcaccctcagacgtgcacttaaagtggtggttgtcaacggtgccttccatgtacagcttcatgtgcatgttctctttgatcagttcgctcatctctaggattcctccggttccttaaaggcaaattaagcggctgctgttgctgcattgattaagggcggccgtagccgcccttagtgcttgattacaggacgaaacctgcaatctgtcaagtaaactcaacaaacttcggaataaaaatcccgaagagtcagagaattactcgcctttagctgctttgaaagcttcagccattgcgttgttggagaagtttgcatcttcctgtttgttaacagttgcgattgcatctttctcgtcagcttcgtctttcgcacgaacagacaggctgattgcgcggtttttacgatcaacgccggtgaatttagcttcaacttcgtcgccaacgctcagaaccagggtagcgtcttcaacgcggtcacgggatgcttcagaagcacgcaggtaaccttcaacgccgtcagccagttctacggttgcgcctttagcgtcaactgcagttactttaccggttacgatagcgcctttcttgttcagagcaacccagttgttgaacggatcttctgcgagctgtttaacgcccagggagatacgttcacgttctgcgtcaacctgcagaacaactgcagcgatttcgtcgccttttttgtattcacgaactgcttcttcgcctgcaacgttccaggagatgtcagacaggtgaaccaggccgtcgatgccgccgtccaagccgatgaagataccgaagtcagtgatagacttgattttaccttcaacacggtcgcccttgttgtgggtttccgcgaactgctgccacgggttagctttgcactgtttcagaccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatactagaatttttagcaactaaacaggggaaaacaattacagatttttatctttcgattacgatttttggtttatttcttgatttatgaccgagatcttacttttgttgcgcaattgtacttattgcatttttctcttcgaggaattacccagtttcatcattccattttattttgcgagcgagcgcacacttgtgaattatctcaatagcagtgtgaaataacataattgagcaactgaaagggagtgcccaatattacgacatcatccatcacccgcggcattacctgattatggagttcaatactagagatggcttcctccgaagacgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtcacgagttcgaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgggacatcctgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttcaaatgggaacgtgttatgaacttcgaagacggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcgtggtaccaacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagacggtgctctgaaaggtgaaatcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtgcttacaaaaccgacatcaaactggacatcacctcccacaacgaagactacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgcttaataacgctgatagtgctagtgtagatcgctactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagctcgaggcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcgatatcaaattacgccccgccctgccactcatcgcagtactgttgtaattcattaagcattctgccgacatggaagccatcacaaacggcatgatgaacctgaatcgccagcggcatcagcaccttgtcgccttgcgtataatatttgcccatggtgaaaacgggggcgaagaagttgtccatattggccacgtttaaatcaaaactggtgaaactcacccagggattggctgagacgaaaaacatattctcaataaaccctttagggaaataggccaggttttcaccgtaacacgccacatcttgcgaatatatgtgtagaaactgccggaaatcgtcgtggtattcactccagagcgatgaaaacgtttcagtttgctcatggaaaacggtgtaacaagggtgaacactatcccatatcaccagctcaccgtctttcattgccatacgaaattccggatgagcattcatcaggcgggcaagaatgtgaataaaggccggataaaacttgtgcttatttttctttacggtctttaaaaaggccgtaatatccagctgaacggtctggttataggtacattgagcaactgactgaaatgcctcaaaatgttctttacgatgccattgggatatatcaacggtggtatatccagtgatttttttctccattttag
Table 8 : Features of psb1c3_double-inverse_ihfB800BFP_xylaRFP
Feature name | End | Start |
Bacterial terminator |
179 |
222 |
mTagBFP |
246 |
950 |
ihfB800 promoter |
957 |
1755 |
Ori |
3762 |
3174 |
Chloramphenicol resistance gene |
4063 |
4719 |
psb1c3_double-inverse_ihfB800RFP_xylaBFP :
cgccccgccctgccactcatcgcagtactgttgtaattcattaagcattctgccgacatggaagccatcacaaacggcatgatgaacctgaatcgccagcggcatcagcaccttgtcgccttgcgtataatatttgcccatggtgaaaacgggggcgaagaagttgtccatattggccacgtttaaatcaaaactggtgaaactcacccagggattggctgagacgaaaaacatattctcaataaaccctttagggaaataggccaggttttcaccgtaacacgccacatcttgcgaatatatgtgtagaaactgccggaaatcgtcgtggtattcactccagagcgatgaaaacgtttcagtttgctcatggaaaacggtgtaacaagggtgaacactatcccatatcaccagctcaccgtctttcattgccatacgaaattccggatgagcattcatcaggcgggcaagaatgtgaataaaggccggataaaacttgtgcttatttttctttacggtctttaaaaaggccgtaatatccagctgaacggtctggttataggtacattgagcaactgactgaaatgcctcaaaatgttctttacgatgccattgggatatatcaacggtggtatatccagtgatttttttctccattttagcttccttagctcctgaaaatctcgataactcaaaaaatacgcccggtagtgatcttatttcattatggtgaaagttggaacctcttacgtgcccgatcaactcgagtgccacctgacgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggcagaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagagcgatctacactagcactatcagcgttattaagcaccggtggagtgacgaccttcagcacgttcgtactgttcaacgatggtgtagtcttcgttgtgggaggtgatgtccagtttgatgtcggttttgtaagcacccggcagctgaaccggttttttagccatgtaggtggttttaacttcagcgtcgtagtgaccaccgtctttcagtttcagacgcattttgatttcacctttcagagcaccgtcttccgggtacatacgttcggtggaagcttcccaacccatggtttttttctgcataaccggaccgtcggacgggaagttggtaccacgcagtttaactttgtagatgaactcaccgtcttgcagggaggagtcctgggtaacggtaacaacaccaccgtcttcgaagttcataacacgttcccatttgaaaccttccgggaaggacagtttcaggtagtccgggatgtcagccgggtgtttaacgtaagctttggaaccgtactggaactgcggggacaggatgtcccaagcgaacggcagcggaccacctttggtaactttcagtttagcggtctgggtaccttcgtacggacgaccttcaccttcaccttcgatttcgaactcgtgaccgttaacggaaccttccatacgaactttgaaacgcatgaactctttgataacgtcttcggaggaagccatctctaggattcctccggttccttaaaggcaaattaagcggctgctgttgctgcattgattaagggcggccgtagccgcccttagtgcttgattacaggacgaaacctgcaatctgtcaagtaaactcaacaaacttcggaataaaaatcccgaagagtcagagaattactcgcctttagctgctttgaaagcttcagccattgcgttgttggagaagtttgcatcttcctgtttgttaacagttgcgattgcatctttctcgtcagcttcgtctttcgcacgaacagacaggctgattgcgcggtttttacgatcaacgccggtgaatttagcttcaacttcgtcgccaacgctcagaaccagggtagcgtcttcaacgcggtcacgggatgcttcagaagcacgcaggtaaccttcaacgccgtcagccagttctacggttgcgcctttagcgtcaactgcagttactttaccggttacgatagcgcctttcttgttcagagcaacccagttgttgaacggatcttctgcgagctgtttaacgcccagggagatacgttcacgttctgcgtcaacctgcagaacaactgcagcgatttcgtcgccttttttgtattcacgaactgcttcttcgcctgcaacgttccaggagatgtcagacaggtgaaccaggccgtcgatgccgccgtccaagccgatgaagataccgaagtcagtgatagacttgattttaccttcaacacggtcgcccttgttgtgggtttccgcgaactgctgccacgggttagctttgcactgtttcagaccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatactagaatttttagcaactaaacaggggaaaacaattacagatttttatctttcgattacgatttttggtttatttcttgatttatgaccgagatcttacttttgttgcgcaattgtacttattgcatttttctcttcgaggaattacccagtttcatcattccattttattttgcgagcgagcgcacacttgtgaattatctcaatagcagtgtgaaataacataattgagcaactgaaagggagtgcccaatattacgacatcatccatcacccgcggcattacctgattatggagttcaatactagagatgagcgaactgatcaaagagaacatgcacatgaagctgtacatggaaggcaccgttgacaaccaccactttaagtgcacgtctgagggtgagggtaagccgtacgaaggcacccaaaccatgcgtatcaaagttgtggagggcggtccactgccgttcgcttttgacattctggcgaccagcttcctgtacggttccaaaacgttcattaaccatactcagggcattccggatttcttcaaacagagctttccggaaggtttcacctgggagcgtgtcaccacgtatgaagatggtggtgtgttgaccgccacccaagatacctccctgcaagatggctgtctgatctataacgtgaaaattcgtggcgtcaactttacgagcaatggtccggtgatgcagaagaaaaccctgggttgggaggcgtttacggaaaccctgtatccggccgatggtggcctggagggccgtaacgacatggcactgaagctggttggtggcagccatttgatcgcaaatatcaagacgacgtaccgcagcaagaaaccggcgaaaaatctgaagatgccgggtgtttactatgtcgactaccgtctggaacgcattaaagaagcgaataatgagacttacgtggagcagcacgaggttgcagtcgcgcgctattgcgacttgcctagcaagctgggtcataaactgaattaataatactagtagcggccgctgcagtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgttatgcaggcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccacaggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaagaacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagctcgaggcttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcgatatcaaatta
Table 9 : Features of psb1c3_double-inverse_ihfB800RFP_xylaBFP
Feature name | End | Start |
CmR gene |
1 |
657 |
Bacterial terminator |
841 |
884 |
mRFP1 |
908 |
1613 |
ihfB800 promoter |
1620 |
2418 |
Ori |
4424 |
3836 |
DARPin and Allergen gBlocks
ompA-DARPin sequence with sfGFP and HIS-tag :
ttaatgatggtgatggtgatggtgatgtttgtataattcatccatgccatgggtaatacccgccgctgtaacaaattccagcaggaccatgtgatcccgcttctcatttggatcttttgaaagtacactttgtgtcgacaaataatgattgtccggcagcagcacggggccatcgccaataggggtattctgctgataatgatcggccagttggacagagccatcttcaacgttatgacggattttgaaatttgctttaatgccatttttttgtttgtctgcCgtgatatacacgttatgactgttaaagttatattctagtttatgcccaagtatgttaccgtcttctttgaagtcaatacctttcagttcaatgcggttaactaacgtatcgccttcaaacttgacttcagcgcgggttttgtaggttccgtcatccttaaaggagatggtacgttcctgcacgtaaccctccggcatcgcgcttttgaaaaaatcgtgctgtttcatgtgatcagggtagcgcgagaaacactgtaccccataagtcagcgtcgtgaccaacgtcggccacggcactggcagtttaccagtggtgcaaataaacttgagggtgagttttccattcgtggcgtcgccctcaccttcaccacgtacgctaaacttgtgcccgttcacatctccgtccagctcaaccaggatcggaaccacgcctgtgaacaactcttcgcctttgctactgctaatgcccagtttctgcaaaatttccgccagatcctcgttcccattgtcgatgctgatgtcgaacgcagttttaccaaacttatcttgggcgttaacgtctgctccatgtttgagcagcacctcgacaatttcaaggtgatcagcccaggcagccaagtgcagcggggtgcgaccggtattgcccgtcgcgtttacatctgcgccatttttcagtaaaacttccacaatttccagatggcctagcatggctgcaagatgcagaggtgtgtggccccaatagtcattcgcgttgacgtccgccccgttggcggtcagaatgcgaacttcatcgtcttgtccggcgcgagccgcttcgagtaatttcttgccgagatcgctaccgctctgaaaatacaggttttcactgctaatgccacgcgtcgcaatttcgggggtgatcgcatactcgacacccccggcgaaaactggactcacccccgtatcatgatttttgccatatacgttgctcttggtatctgcgcgccacaccatgccgcctaaccgagtgtagatgtccaggtcatcagtaatagggtagccaagtttcgctgtcaactgaacgccctgtgctttataagccccgttctctacggaacctttgtacggcatgcgtcccagccaatcatagcccatttcaaatcccacgtacgggttgacctgataaccaccaaaggcaccagcacccagttggttttcgtgggtcgggccattattattctgatcaattttcgcgttgctactgcaccctgccagcagcgtgctacctaaaatcaccgcgcccaaaacaagtttggtggctttcatatgtatattacctcct
Table 10 : Features of ompA-DARPin sequence with sfGFP and HIS-tag
Feature name | End | Start |
Stop codon |
1 |
3 |
HIS-tag |
4 |
27 |
sfGFP |
28 |
738 |
GISS linker |
739 |
750 |
DARPin e_79 |
751 |
1125 |
TEV clivage site |
1126 |
1146 |
GISS linker |
1147 |
1158 |
ompA |
1159 |
1587 |
RBS |
1595 |
1603 |
ompA-Gal d 2 sequence and HIS-tag :
ttaatgatggtgatggtgatggtgatgactgctaatgcccggggaaacacagcggccaaagaagagaacggcgttggttgcgatgtgtttgatacagaacagaaacggatggtcagcgcgaaattcttccgagacgcttgccgcatccactccagcttccgctgaccctaccacttcacggcctgcttcattaatttctgcatgcgccgcatggaccgcttgagatatcttcaggctctctgctgaggagatgccagacagattggctgaggagctaaacacgtccgtaatgcccatagccattaagacagacgtcaggttatatttttcttccattttcatgcgaggtaagtacactttaatcttgcgttcttccataacattcgaactggtccattccgtcagtttttcaaagttaataatactctcaagctgctccagccctgagacttcatcaggcaacagcaccaacatgctcattgtcccactggcaaatggcagctccagaatcttcattttctccgaagccatcgatgccactctaaataaaccaatctggtacatcatctgcactggtttgctttcttgctcagtcactcggaacggcatcgcctgtgtgtcttcatccttaaacgctttctcccacagacctttgaagacaatggcattcaccagaaccatcgcagtctgagaatccacggagctcggttgcaggacattacggataataccgttggtctgactttctacccaggaattgatgagctcccgggcttgatctgccgcggtttgaaagttgatcggttccaagcctccgcgatacagttctttcacgcactgcaagtattccggcaggatgggataacgctcttccgcatataaacgactggccaggctgaacgaataaacatcgttcggtttggtgatttggttgaggatgtcccgaaggctagagtgaacatttaccgaagtgccgcactgagcttcaatactgtcgccgaaacctggaagtttatcaaagcgaacaactttatttatctgcgtacgggtgctatctttagcacccaggtataccatggctagcgctgacatgatggcaatggggcaatagaaaatgttctcgttggcatggtggactttaagctccttgaatacatcaaaacaaaattccatgcttgccgcaccaatggagcccatgctctgaaaatacaggttttcactgctaatgccacgcgtcgcaatttcgggggtgatcgcatactcgacacccccggcgaaaactggactcacccccgtatcatgatttttgccatatacgttgctcttggtatctgcgcgccacaccatgccgcctaaccgagtgtagatgtccaggtcatcagtaatagggtagccaagtttcgctgtcaactgaacgccctgtgctttataagccccgttctctacggaacctttgtacggcatgcgtcccagccaatcatagcccatttcaaatcccacgtacgggttgacctgataaccaccaaaggcaccagcacccagttggttttcgtgggtcgggccattattattctgatcaattttcgcgttgctactgcaccctgccagcagcgtgctacctaaaatcaccgcgcccaaaacaagtttggtggctttcatatgtatattacctcct
Table 11 : Features of ompA-Gal d 2 sequence and HIS-tag
Feature name | End | Start |
Stop codon |
1 |
3 |
HIS-tag |
4 |
27 |
GISS linker |
28 |
39 |
Gal d 2 |
40 |
1197 |
TEV clivage site |
1198 |
1218 |
GISS linker |
1219 |
1230 |
ompA |
1231 |
1659 |
RBS |
1667 |
1675 |
Ara h 2 sequence with HIS-tag :
ttaatgatggtgatggtgatggtgatgactgctaatgccgtatcgatcgcggccaccggattcaacttccaggtcgcaacgctgtggtgcgcgaaggccgcactgttgaggcaagttgcgtagttcgcgtttgaactgttgctcctgttgacgcccctgcaagcgatcgctctgattctccataatctgttgtaatgcttcacacatacagcgctgattgttttcaaattcgttcagttcattgcaacagcgctcttgatgctgagacgaaccagcgccacgccgatcatatggactcgggctgtacggatcacggcgatccgggtcctgactaggtgaatacggatcctgcgacgggctgtacggatcccgaccatatgaatcttcgtcacgttggattttctgcattaaatgttgttcacagggcctcaggttcgcacgctccagctgggactggcatctacggtctccttggagttcccactgctgacgcgcagacgcgtgcgcagccagcagaaaaagggccagggccaccagaatggtgagcttggccat
Table 12 : Features of Ara h 2 sequence with HIS-tag
Feature name | End | Start |
Stop codon |
1 |
3 |
HIS-tag |
4 |
27 |
GISS linker |
28 |
39 |
Ara h 2 |
40 |
555 |
Ana o 3 sequence with HIS-tag :
atggcgaaatttcttttattattgagcgctttcgcagtactgctgctggttgcaaatgcgtcgatttatcgcgccattgtggaggtagaagaagactccggtcgtgagcagtcatgtcagcgtcaattcgaagagcagcagcggtttcgtaattgtcagcgctatgttaaacaagaagtccagcgtggcgggcggtacaaccaacgccaggagagtctaagagaatgctgccaggaactgcaagaggtcgatcgccgttgtcgctgtcagaacctggaacaaatggtgcgccagctccagcagcaagaacagatcaagggtgaggaagtgcgagaattgtacgaaaccgcctctgaactgccacgtatttgctccatcagcccgtcgcaaggctgccagtttcagagtagctatggcattagcagtcatcaccatcaccatcaccatcattaa
Table 13 : Features of Ana o 3 sequence with HIS-tag
Feature name | End | Start |
Stop codon |
1 |
3 |
HIS-tag |
4 |
27 |
GISS linker |
28 |
39 |
Ana o 3 |
40 |
453 |
Der p 1 sequence with HIS-tag :
ttaatgatggtgatggtgatggtgatgactgctaatgcctaatatcaccacataaggatactcttcaatcatcattaagtcaatattggctgcaaagtaaccatagccgttatcaccccaattcgtatcccatgagttacgaacgatccaataatccaccccctgagcattactatagccaactatattaaccgcatggtagttcggctgataaccgttatcacgctggataatggtacggccatcgtaatgcctaaatgcgtccaggtctttaataccaataatgacagcgatcgcagagtgggtttgtgccagcgcttcacggatcttattgacgtttggcggataaatctggcaatagttactaatgccgaagcgctgcgcgttcggacgccgacaggattgttcgcgtgctacatagcgatagtagctttcctgaactacgccattgtgttggatgtattcaatgccgcgtggaatggtatccccatggcatccatgctgtgatgcacagtcgacaagttcttgttccgctaagtcaagactctggtttctgtaggccaggtacgcgctttcagtcgcagccacgcccgaaaaggcccagcagcttccgcaacccccttgcatgcggatgggagttactgtacgcatctggcgcaagtcaatttcagccggagcgttaccgttgatgctacaggcattcgtctcggcattcaaatcaaactgtgttttcagatgctcaaaggcttctgctgacatcagaaatcggttcttaaattcatccagagagagatcggacaggtgattgattgcgccaccattcgactgcacgtatttgacggattccaggaagtttttgcgtgcggcttcctcatcctcgaacgtggcgtagctcttattgaacgcttttttatactcttcaaaggttttgatgctactcggccgcgcataaaccgcagacagcgcaaggagcgacgcaatggccagcacgattttcat
Table 14 : Features of Der p 1 sequence with HIS-tag
Feature name | End | Start |
Stop codon |
1 |
3 |
HIS-tag |
4 |
27 |
GISS linker |
28 |
39 |
Der p 1 |
40 |
999 |
Fluorophore sequences
Sequence with ihfB800 promoter, mRFP1 gene and bacterial terminator :
atttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagagcgatctacactagcactatcagcgttattaagcaccggtggagtgacgaccttcagcacgttcgtactgttcaacgatggtgtagtcttcgttgtgggaggtgatgtccagtttgatgtcggttttgtaagcacccggcagctgaaccggttttttagccatgtaggtggttttaacttcagcgtcgtagtgaccaccgtctttcagtttcagacgcattttgatttcacctttcagagcaccgtcttccgggtacatacgttcggtggaagcttcccaacccatggtttttttctgcataaccggaccgtcggacgggaagttggtaccacgcagtttaactttgtagatgaactcaccgtcttgcagggaggagtcctgggtaacggtaacaacaccaccgtcttcgaagttcataacacgttcccatttgaaaccttccgggaaggacagtttcaggtagtccgggatgtcagccgggtgtttaacgtaagctttggaaccgtactggaactgcggggacaggatgtcccaagcgaacggcagcggaccacctttggtaactttcagtttagcggtctgggtaccttcgtacggacgaccttcaccttcaccttcgatttcgaactcgtgaccgttaacggaaccttccatacgaactttgaaacgcatgaactctttgataacgtcttcggaggaagccatctctaggattcctccggttccttaaaggcaaattaagcggctgctgttgctgcattgattaagggcggccgtagccgcccttagtgcttgattacaggacgaaacctgcaatctgtcaagtaaactcaacaaacttcggaataaaaatcccgaagagtcagagaattactcgcctttagctgctttgaaagcttcagccattgcgttgttggagaagtttgcatcttcctgtttgttaacagttgcgattgcatctttctcgtcagcttcgtctttcgcacgaacagacaggctgattgcgcggtttttacgatcaacgccggtgaatttagcttcaacttcgtcgccaacgctcagaaccagggtagcgtcttcaacgcggtcacgggatgcttcagaagcacgcaggtaaccttcaacgccgtcagccagttctacggttgcgcctttagcgtcaactgcagttactttaccggttacgatagcgcctttcttgttcagagcaacccagttgttgaacggatcttctgcgagctgtttaacgcccagggagatacgttcacgttctgcgtcaacctgcagaacaactgcagcgatttcgtcgccttttttgtattcacgaactgcttcttcgcctgcaacgttccaggagatgtcagacaggtgaaccaggccgtcgatgccgccgtccaagccgatgaagataccgaagtcagtgatagacttgattttaccttcaacacggtcgcccttgttgtgggtttccgcgaactgctgccacgggttagctttgcactgtttcaga
Table 15 : Features of sequence with ihfB800 promoter, mRFP1 gene and bacterial terminator
Feature name | End | Start |
Bacterial terminator |
1 |
1578 |
mRFP1 |
68 |
773 |
ihfB800 |
780 |
1578 |
Sequence with ihfB800 promoter, mTagBFP gene and bacterial terminator :
atttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagattattaattcagtttatgacccagcttgctaggcaagtcgcaatagcgcgcgactgcaacctcgtgctgctccacgtaagtctcattattcgcttctttaatgcgttccagacggtagtcgacatagtaaacacccggcatcttcagatttttcgccggtttcttgctgcggtacgtcgtcttgatatttgcgatcaaatggctgccaccaaccagcttcagtgccatgtcgttacggccctccaggccaccatcggccggatacagggtttccgtaaacgcctcccaacccagggttttcttctgcatcaccggaccattgctcgtaaagttgacgccacgaattttcacgttatagatcagacagccatcttgcagggaggtatcttgggtggcggtcaacacaccaccatcttcatacgtggtgacacgctcccaggtgaaaccttccggaaagctctgtttgaagaaatccggaatgccctgagtatggttaatgaacgttttggaaccgtacaggaagctggtcgccagaatgtcaaaagcgaacggcagtggaccgccctccacaactttgatacgcatggtttgggtgccttcgtacggcttaccctcaccctcagacgtgcacttaaagtggtggttgtcaacggtgccttccatgtacagcttcatgtgcatgttctctttgatcagttcgctcatctctaggattcctccggttccttaaaggcaaattaagcggctgctgttgctgcattgattaagggcggccgtagccgcccttagtgcttgattacaggacgaaacctgcaatctgtcaagtaaactcaacaaacttcggaataaaaatcccgaagagtcagagaattactcgcctttagctgctttgaaagcttcagccattgcgttgttggagaagtttgcatcttcctgtttgttaacagttgcgattgcatctttctcgtcagcttcgtctttcgcacgaacagacaggctgattgcgcggtttttacgatcaacgccggtgaatttagcttcaacttcgtcgccaacgctcagaaccagggtagcgtcttcaacgcggtcacgggatgcttcagaagcacgcaggtaaccttcaacgccgtcagccagttctacggttgcgcctttagcgtcaactgcagttactttaccggttacgatagcgcctttcttgttcagagcaacccagttgttgaacggatcttctgcgagctgtttaacgcccagggagatacgttcacgttctgcgtcaacctgcagaacaactgcagcgatttcgtcgccttttttgtattcacgaactgcttcttcgcctgcaacgttccaggagatgtcagacaggtgaaccaggccgtcgatgccgccgtccaagccgatgaagataccgaagtcagtgatagacttgattttaccttcaacacggtcgcccttgttgtgggtttccgcgaactgctgccacgggttagctttgcactgtttcaga
Table 16 : Features of sequence with ihfB800 promoter, mTagBFP gene and bacterial terminator
Feature name | End | Start |
Bacterial terminator |
1 |
44 |
mTagBFP |
68 |
772 |
ihfB800 |
779 |
1577 |
Sequence with ihfB800 promoter, mScarlet-I gene and bacterial terminator :
atttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattcgcggccgcttctagattatttgtacagttcatccataccaccggtagagtgacggccttcagaacgttcgtattgttcaacaacggtgtaatcttcgttgtggctggtaatatccagtttacgatcaacgttgtatgcacctggcatttgaactggttttttcgctttgtaggtggttttgaaatctgccaggtaacgaccgccatctttcagacgcagtgccattttgatatcacctttcagaacgccatcttctgggtacagacgttcggtagatgcttcccaacccatggtttttttctgcataactggaccatctggtggaaagttagtaccacgcagtttaactttgtagatcagagtaccatcttccagagaggtatcttgggtaaccgtaactgcaccaccatcttcaaaattcataacacgttcccatttgaaaccttccggaaaagattgtttgtagtagtctggaatatctgctgggtgtttgataaatgcacgagaaccgtacataaattgtggagacagaatatcccaagaaaatggcagtggaccacctttggtaactttcagttttgcggtttgagtaccttcgtatggacgaccttcgccttcaccttcaatttcaaattcgtggccgttcatagaaccttccatgtgaactttgaagcgcataaattctttgatcactgcttcacctttagaaaccatctctaggattcctccggttccttaaaggcaaattaagcggctgctgttgctgcattgattaagggcggccgtagccgcccttagtgcttgattacaggacgaaacctgcaatctgtcaagtaaactcaacaaacttcggaataaaaatcccgaagagtcagagaattactcgcctttagctgctttgaaagcttcagccattgcgttgttggagaagtttgcatcttcctgtttgttaacagttgcgattgcatctttctcgtcagcttcgtctttcgcacgaacagacaggctgattgcgcggtttttacgatcaacgccggtgaatttagcttcaacttcgtcgccaacgctcagaaccagggtagcgtcttcaacgcggtcacgggatgcttcagaagcacgcaggtaaccttcaacgccgtcagccagttctacggttgcgcctttagcgtcaactgcagttactttaccggttacgatagcgcctttcttgttcagagcaacccagttgttgaacggatcttctgcgagctgtttaacgcccagggagatacgttcacgttctgcgtcaacctgcagaacaactgcagcgatttcgtcgccttttttgtattcacgaactgcttcttcgcctgcaacgttccaggagatgtcagacaggtgaaccaggccgtcgatgccgccgtccaagccgatgaagataccgaagtcagtgatagacttgattttaccttcaacacggtcgcccttgttgtgggtttccgcgaactgctgccacgggttagctttgcactgtttcaga
Table 17 : Features of sequence with ihfB800 promoter, mScarlet-I gene and bacterial terminator
Feature name | End | Start |
Bacterial terminator |
1 |
44 |
mScarlet-I |
68 |
766 |
ihfB800 |
773 |
1571 |