Parts
The purpose of our project is to help facilitate the screening and prognosis of breast cancer for ordinary people at home. We developed a detection kit for two circRNA biomarkers, hsa_circ_0001785 and hsa_circ_0001982, of breast cancer. They are the target circRNAs for detection in this project. The kit is a cell-free system containing all molecular machineries needed for a CRISPR-Cas12a-based detection process. In this project, we have successfully constructed 8 composite parts and 10 basic parts for igRNAs and dsDNAs .
No | Name | Type | Description | Length |
---|---|---|---|---|
1 | BBa_K4409000 | Basic | gRNA / crRNA fixed-loop repeat for Cas12a | 23bp |
2 | BBa_K4409001 | Basic | guide of igRNA (hsa_circ_0001785) | 20bp |
3 | BBa_K4409002 | Basic | guide of igRNA (hsa_circ_0001982) | 21bp |
4 | BBa_K4409003 | Basic | trigger-RNA sensor of igRNA (hsa_circ_0001785) | 43bp |
5 | BBa_K4409004 | Basic | trigger-RNA sensor of igRNA (hsa_circ_0001982)_Coupled with GAPDH as guide sequence | 43bp |
6 | BBa_K4409005 | Basic | trigger-RNA sensor of igRNA (hsa_circ_0001982)_coupled with hsa_circ_0001785 as the guide sequence | 43bp |
7 | BBa_K4409006 | Basic | dsDNA (GAPDH) | 27bp |
8 | BBa_K4409007 | Basic | dsDNA(hsa_circ_0001785) | 24bp |
9 | BBa_K4409008 | Basic | dsDNA(hsa_circ_0001982) | 25bp |
10 | BBa_K4409009 | Composite | igRNA (AAG+GAPDH as guide+ hsa_circ_0001982 as trigger) | 86bp |
11 | BBa_K4409010 | Composite | igRNA (CT+GAPDH as guide+ hsa_circ_0001982 as trigger) | 86bp |
12 | BBa_K4409011 | Composite | igRNA (CT+ hsa_circ_0001785 as guide+ hsa_circ_0001982 as trigger) | 84bp |
13 | BBa_K4409012 | Composite | igRNA (CT+ hsa_circ_0001982 as guide+ hsa_circ_0001785 as trigger) | 87bp |
14 | BBa_K4409013 | Composite | gRNA (CT+GAPDH as guide) | 43bp |
15 | BBa_K4409014 | Composite | gRNA (CT+ BBa_K3859000) | 50bp |
16 | BBa_K4409015 | Composite | gRNA (AAG+ BBa_K3859000) | 51bp |
17 | BBa_K4409016 | Composite | gRNA (AAG+ GAPDH as guide) | 44bp |
18 | BBa_K4409017 | Basic | guide of igRNA (GAPDH) | 23bp |