Experiment Design


Biosensor #1: Heat shock-inducible Promoter

Heat shock-inducible promoter activity in C. vulgaris is tested by observing GFP expression.
The fluorescence intensity was compared with control.

  • pHsp70A > Kozak > egfp > Tnos
      a. Incubation in the dark and shifted into the light for 1 h.
      b. Incubation in the light and exposed to heat shock (40°C) for 30 min.
    p35S > Kozak > eGFP > Tnos (Control)



  • Biosensor #1-2: Cold-inducible Promoter

    Cold-inducible promoter activity in C. vulgaris is tested by observing GFP expression.
    The fluorescence intensity was compared with control.

  • pCnAFP>Kozak>eGFP>Tnos
      a. Incubation in low temperature (10°C) for 2 hour.
    p35S>Kozak>eGFP>Tnos (Control)



  • Biosensor #2: Bioswitch: Inducible Promoter - Recombinase Activity

    Recombinase activity, triggered by inducible promoters, is tested by observing GFP expression.
    The fluorescence intensity was compared with control.

    p35S>attB>mCherry>Tnos : pHSP70A>Kozak>phiC31>Tnos : attP>Kozak>eGFP>Tnos
    (Heat shock inducible promoter + phiC31 recombinase)
    • - After recombination : p35S > attB-attP > Kozak > eGFP > Tnos
      a. Incubation in the dark and shifted into the light for 1 h.
      b. Incubation in the light and exposed to heat shock (40°C) for 30 min.


    p35S>attB>mCherry>Tnos : pCnAFP>Kozak>phiC31>Tnos : attP>Kozak>eGFP>Tnos
    (Cold inducible promoter + phiC31 recombinase)
      - After recombination : p35S > attB-attP > Kozak > eGFP > Tnos
      a. Incubation in low temperature (10°C) for 2 hours.


    p35S>loxP(1)>mCherry>Tnos : pHSP70A>Kozak>Cre>Tnos : loxP(2)>Kozak>eGFP>Tnos
    (Heat shock inducible promoter + Cre recombinase)
      - After recombination : p35S > loxP(1)-loxP(2) > Kozak > eGFP > Tnos
      a. Incubation in the dark and shifted into the light for 1 h.
      b. Incubation in the light and exposed to heat shock (40°C) for 30 min.


    p35S>loxP(1)>mCherry>Tnos : pCnAFP>Kozak>Cre>Tnos : loxP(2)>Kozak>eGFP>Tnos
    (Cold inducible promoter + Cre recombinase)
      - After recombination : p35S > loxP(1)-loxP(2) > Kozak > eGFP > Tnos
      a. Incubation in low temperature (10°C) for 2 hours.
    p35S>eGFP>nos terminator (Control)



  • Biosensor #3: Quorum-Sensing Promoter & Protein

    Quorum-Sensing promoter activity in C. vulgaris is tested by observing GFP expression.
    The expression is observed in various concentrations of N-3-oxo-octanoyl homoserine lactone (C8 AHL).
    The observation is made in liquid medium with 0 μM, 0.1 μM, 1 μM, 100μM, 1000 μM, 10000 μM C8 AHL. The fluorescence intensity was compared with control.

    p4X(TraR)::m35S>Kozak>eGFP>Tnos : pHSP70A/pRbcS2>Kozak>VP16 TAD::TraR>Tnos
    p4X(TraR)::m35S>Kozak>eGFP>Tnos : p35S>Kozak>VP16 TAD::TraR>Tnos
    p35S>Kozak>eGFP>Tnos (Control)



    Experiment Protocol

    Microalgae Transformation (Cha et al., 2012)

    1. The mediums and supplements for microalgae transformation are obtained from Kisan Bio, South Korea.
    1. 1. Supplement Luria Broth with 5 mM glucose, 50 mg/L kanamycin
    2. 2. Inoculate Agrobacterium. Tumefaciens (KCTC 12031) single colonies in 10mL of Luria Broth
    3. 3. Under constant agitation at 200 rpm on a rotary shaker at 30°C, culture overnight in the dark
    4. 4. Inoculate 5mL of overnight culture from step 3 in 50mL of same medium
    5. 5. Under constant agitation at 200 rpm at 27°C, culture until OD600 = 0.8–1.2 in the dark
    6. 6. Centrifuge to harvest bacterial culture
    7. 7. Wash with induction medium (BG11 + 100 μM acetosyringone, pH 5.6) and dilute to OD600 = 0.5
    8. 8. Pre-culture total of 5 × 106 Chlorella cells from a log-phase culture (OD600 = 0.5–1.0) on BG11 solidified with 1.5% (w/v) bacto-agar at 25°C for 5 days
    9. 9. Harvest bacterial culture with induction medium
    10. 10. Mix algal pellet with 200 μL bacterial suspension
    11. 11. Plate on induction medium solidified with 1.5% (w/v) bacto-agar
    12. 12. Co-cultivate algae with bacteria (3 days, in dark, 25°C)
    13. 13. Harvest cells with 7mL of BG11 supplemented with 500 mg/L cefotaxime and 50 mg/L kanamycin to eliminate Agrobacterium (2 days, in dark, 25°C)
    14. 14. Measure eGFP expression
    15. 15. Plate the remaining cells on selective media with 50 mg/L kanamycin and 500 mg/L cefotaxime
    16. 16. Incubate transformed cells in dark before exposure to light (2 days, 25°C)
    17. 17. Grow cells on LB agar plates to detect any Agrobacterium (7 days in dark, 25°C)


    Fluorescence microplate reader assay (Molino et al., 2018)

    1. 1. Inoculate transformed colony in 1mL BG11 selective media and incubate at 25°C under constant illumination (50 μmol photons/m2/s) and constant agitation at 100–150 rpm on a rotary shaker, culture for 7 days
    2. 2. Transfer 100 μL cells to wells of a black, clear bottom 96-well plate
    3. 3. Set up microplate reader (ThermoFisher Scientific, USA) as table 1
    4. 4. Measure fluorescence using BG11 medium as blank and wild type cells as negative control
    5. 5. Repeat steps 5-7 with supernatant in the Deep-well plate obtained by centrifugation at 3000 ×g for 10 min
    6. 6. The fluorescent signal is normalized by OD600.

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    Fluorescence microscopic observation of EGFP expression (Yang et al., 2015)
    1. The mediums and supplements for microalgae transformation are obtained from Kisan Bio, South Korea.
    1. - eGFP fluorescence was visualized by using a narrow-band filter (Olympus U-FBNA, excitation filter 470–495 nm, barrier filter 510–550 nm).
    2. - Chlorophyll autofluorescence was observed using a wide-band filter (Olympus U-FBW, excitation filter 460–495 nm, barrier filter 510 nm)