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Safety

Biosafety Level of our Lab
Lab Security Measures
Engineering Safety
Biosafety of our parts

Biosafety Level of our Lab

Level 1 – standard microbiological lab 
‍
Organisms We Used:

   
Name of the organism   
   
Biosafety level   
   
E.coli (use for engineering)   
   
Biohazard Level 1   
   
B.subtilis (use for engineering)   
   
Biohazard Level 1   
   
R.solani (use for fungal assay)   
   
Biohazard Level 1   
   
T.rossicum (use for fungal assay)   
   
Biohazard Level 1   
   
S.cerevisiae (use for fungal assay)   
   
Biohazard Level 1   

Chemicals

Here we present the list of chemicals we used during ourexperiments. We noted down their corresponding hazard levels to ensure that wehandled each chemical safely.

   
Name of Chemical and Reagent   
   
Hazard Level   
   
Tryptone    
   
Not hazardous    
   
Yeast extract    
   
Not hazardous    
   
NaCl    
   
Not hazardous   
   
LB Broth with aga   
   
Not hazardous   
   
K2HPO4    
   
May cause irritation to eyes, skin, and digestive tract.   
   
KH2PO4    
   
May cause irritation of the digestive tract.   
   
D-glucose     
   
Not hazardous.   
   
Casaminoacis    
   
May cause skin irritation   
   
L-glutamine    
   
Not hazardous   
   
Ferric ammonium citrate   
   
Direct contact can irritate the skin and eyes.   
   
Distilled water    
   
Not hazardous   
   
MgSO4   
   
May cause eye, skin, and respiratory tract irritation.   
   
Phenylalanie    
   
Low dose is not hazardous.   
   
NH4Cl     
   
May cause an asthma-like allergy.   
   
(NH4)2SO4     
   
Harmful if swallowed. May cause skin irritation, eye irritation, and respiratory irritation.   
   
ZnCl2    
   
High dose corrosive to the eyes and skin   
   
CuCl2∙2(H2O)    
   
High dose causes eye, skin, and respiratory tract   irritation.    
   
CoCl2∙6(H2O)    
   
High dose causes irritation.   
   
Na2MoO4    
   
High dose causes irritation.   
   
FeCl3∙6(H2O)    
   
May causes eye or skin irritation.   
   
Na3-Citrate∙3(H2O)    
   
Slightly irritant to eyes.    
   
5X SM base medium    
   
Not hazardous.   

Lab Security Measures

  • Handle microorganisms underbiosafety hoods.
  • Autoclave the glassware, vessels, tips and media before using.
  • Separate trash bins for discarding used plates and culture tubes.
  • Separate trash bins for discarding used tips and Eppendorf tubes.
  • Clean the biosafety hoods andbenches with ethanol before using.
  • Bunsen burners used on benches tohelp avoid contamination.
  • Chemicals and reagents are kept in cabinets.  
  • Use Virkon aquatic tablets todisinfect the waste tanks.
  • Keep the sterile and non-sterile materials separately.

Engineering Safety

To make sure everyone knows how to work safely in the lab, we did the following:

  • Lab induction, and safe practices risk assessment
  • Emergency Protocols
  • COSHH forms: for detergent and use of PET in the imagining suite
  • Risk assessments
  • Allocation of appropriate personal protective equipment, like lab coats, gloves, and goggles

Biosafety of our parts

We have also taken the safety of our final product into accounts:

  • To guarantee that our spores to not contain any foreign DNA, we will use Golden Gate Assembly to assemble self-digesting plasmids, these consist of a reporter protein (GFP), D15exonuclease, Cas9 and gRNA targeting the origin of replication of the plasmid.The D15 sequence comes from E. coli, but will be synthesised and not amplified from genomic DNA. Cas9 assists the cutting of foreign DNA.
  • We will also be performing directed evolution of the GerA receptor, which is native to B. subtilis.

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