Safety

In the process of participating in the 2022 iGEM competition, our team GXU-China

did not use any infectious or pathogenic organisms

.

The whole process was completed in the laboratory

without any open environmental experiments, animal experiments, human experiments, etc

. All our experiments and human practices

comply with the official requirements of iGEM

, and all human practices are carried out with the consent of the parties concerned,

without any infringement

.

Project

GXU-China's entire project in 2022 is "Light regulated sewage treatment bacterial preparation with

Bacillus subtilis

as the chassis", in which the experimental part aims to convert NH

4+

, NH2

OH, NO2-

and NO3- into N2 and remove it from the water body through the "Aerobic denitrification and denitrification metabolic pathway".

The research shows that

Bacillus subtilis

itself has no harmful effect on the environment and organisms

. It is suitable for synthetic biological transformation, so

we take it as our target strain

.

Safety design

1.

Considering that the intermediate product NO may be oxidized to NO2, which is harmful to organisms,

we designed the denitrification pathway

as a safety consideration, which can reduce NO to nitrogen through two enzymes, NOR and NOS, so as to

achieve harmless treatment

. Of course, we have designed and installed a nitrogen oxide gas sensor in our hardware part, which can monitor the concentration of NO and NO2 in the reactor in real time.

If the content exceeds the standard, we will change the reaction conditions or start the suicide mechanism in time to ensure that harmful gases will not be generated further

. At the same time, in the process of laboratory verification, we can also

fully ensure that NO will not leak

through external potassium permanganate solution oxidation method and balloon collection method.

2.

Our team also

designed a suicide mechanism

to induce the expression of NucA by green light irradiation, making the strain commit suicide. For safety reasons, it can

prevent engineering bacteria from leaking into the environment

and

causing damage to the ecosystem

. Secondly,

the population density can be adjusted in time

, so that the bacterial preparation can always be kept at a suitable density and maintain a suitable growth rate. Keep the most efficient treatment efficiency and prevent excessive accumulation of harmful gases.

3.

In addition,

our hardware is designed in a closed manner throughout the whole process

and does not use flowing water as the experimental object. There are

no experimental samples directly discharged into the environment

, which is more convenient for harmless treatment. We have also

designed a special feeding port

for the release of bacterial preparations to ensure that the variables of engineering strains are unique.

After the experiment, rapid sterilization can be carried out by high temperature

and ultraviolet irradiation to ensure that the strains will not spread.

Discussion

At 7:00 pm on September 2, 2022,

the freshwater remediation alliance held a meeting on biosafety issues

, and the participating team included CFCA_China, Nanjing_NFLS, XJTLU-CHINA, Nanjing-China, CHINA-FAFU, GXU-China and NPU-CHINA.

The main purpose of this meeting is to

discuss our safety from three aspects

. Firstly, we aim to

prove that our experimental steps meet the safety standards

. Secondly, we aim to

prove that our engineering bacteria will not cause leakage

. Finally, we

try to ensure that our projects will not cause harm to the environment and human beings

.

After the seven teams introduced their own treatment plans, we discussed some of the current questions, and everyone put forward many points worthy of reference, and

the participants benefited a lot

. The GXU-China team gained safeyear ideas from other teams working in wastewater treatment and other areas, and discussed with other teams at a deeper level that

synthetic biology operations should be carried out within a legal and ethical framework

, after which we further improved our safety solutions based on this meeting.

biosafety-handbook.pdf