Since BCAID comes from a multi-system design, the parts we've built to support the project are quite diverse, extraordinary and novel. Our parts are mainly concentrated in the healing promoting module, the blue light-activated cellulose degradation module and the red light-activated suicide module. We carefully submitted all the components we developed to perform one particular function into Basic Parts in Registry, then each basic part is combined with others orderly and meaningfully to compose functional Composite Parts, and finally submitted in Registry.
Name | Short Description | Long Description |
---|---|---|
BBa_K4211000 | EGF | Epidermal growth factor (EGF) is a protein that stimulates cell growth and differentiation by binding to its receptor, EGFR. |
BBa_K4211001 | bFGF | Basic fibroblast growth factor (bFGF or FGF2) has been found to be a multifunctional growth factor. |
BBa_K4211002 | IL-2 signal sequence | The IL-2 Signal sequence is a secreted peptide sequence. |
BBa_K4211005 | 5×UAS-P(hCMVmin) | 5×UAS-P(hCMVmin) contains five tandem repeats of UAS upstream of a minimal CMV promoter to control expression of the downstream target genes. |
BBa_K4211006 | V5-tag | The V5-tag is a polypeptide isolated from the P and V proteins of simian virus 5 (SV5), usually working as a protein tag. |
BBa_K4211007 | PhyA | PhyA is a red/far-red light-responsive photoreceptor from the plant Arabidopsis thaliana. |
BBa_K4211008 | PhyA-Gal4 Linker | PhyA-Gal4 Linker is a linker to link PhyA and Gal4. |
BBa_K4211009 | Gal4 | The Gal4 transcription factor is a positive regulator of gene expression of galactose-induced genes. |
BBa_K4211010 | P2A | P2A is a porcine teschovirus-1 derived self-cleavage 2A peptide and can cause co-translational cleavage of the encoded polypeptide. |
BBa_K4211011 | FHY1 | FHY1, the shuttle protein far-red elongated hypocotyl 1, can rapidly bind PhyA under illumination with 660 nm light and can dissociate occurring at 730 nm. |
BBa_K4211012 | FHY1-VP64 Linker | FHY1-VP64 Linker is a linker to link FHY1 and VP64. |
BBa_K4211013 | VP64 | VP64, the herpes simplex virus-derived VP16 activation domain, is a kind of transcriptional activators. |
BBa_K4211016 | Cex | Cex is used to cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain. |
BBa_K4211017 | CenA | CenA is used to cut internal beta-1,4-glucosidic bonds. |
BBa_K4211018 | Bglx | Bglx is used to hydrolyze the cellobiose and other short cello-oligosaccharides to glucose. |
BBa_K4211019 | Gal4(65) | The Gal4 transcription factor is a positive regulator of gene expression of galactose-induced genes. |
BBa_K4211020 | Gal4-VVD Linker | Gal4(65)-VVD Linker is a linker to link Gal4(65) and VVD. |
BBa_K4211021 | VVD | VVD, the smallest light-oxygen-voltage (LOV) domain–containing protein, forms a rapidly exchanging dimer upon blue-light activation. |
BBa_K4211022 | VVD-p65AD Linker | VVD-p65AD Linker is a linker to link VVD and p65 Activation Domain. |
BBa_K4211023 | p65 Activation Domain | p65 Activation Domain, known as GAVP, is a transactivator. |
BBa_K4211024 | p65AD-Flag Linker | p65AD-Flag Linker is a linker to link p65AD and Flag. |
BBa_K4211025 | Flag | Flag, known as DYKDDDDK tag, is a hydrophilic tag for recombinant protein technology. |
BBa_K4211026 | Pre LightOn promoter | Pre LightOn promoter is a sequence in front of the 5×UAS(G) sequence. |
BBa_K4211027 | 5×UAS(G) | 5×UAS(G) can bind to Gal4(65) and activate downstream cellulase expression. |
BBa_K4211028 | 5×UASG-TATA Linker | 5×UAS(G)-TATA Linker is a linker to link 5×UAS(G) and TATA. |
BBa_K4211029 | TATA | The TATA Box, Hogness Box, is one of the components that make up the eukaryotic promoter. |
BBa_K4211030 | Post LightOn Promoter | Post LightOn promoter is a sequence behind the TATA sequence. |
BBa_K4211031 | CMV-Kozak Linker | CMV-Kozak Linker is a linker to link CMV and Kozak. |
Name | Short Description | Long Description |
---|---|---|
BBa_K4211003 | LL-37 secretion system | To express LL-37 and secrete LL-37 out of the cell. |
BBa_K4211004 | bFGF secretion system | To express bFGF and secrete bFGF out of the cell. |
BBa_K4211014 | REDMAP-GOI | REDMAP-GOI system is a red light-activated system and can express the gene of interest. |
BBa_K4211015 | REDMAP-MazF | REDMAP-MazF system is a red light-activated system and can express MazF to kill the engineered cells. |
BBa_K4211032 | LightOn-GOI | LightOn-GOI system is a blue light-activated system and can express the gene of interest. |
BBa_K4211053 | LightOn-Cex | LightOn-Cex system is a blue light-activated system and can express Cex gene to secrete exoglucanase. |
BBa_K4211054 | LightOn-CenA | LightOn-CenA system is a blue light-activated system and can express CenA gene to secrete endoglucanase A. |
BBa_K4211055 | LightOn-Bglx | LightOn-Bglx system is a blue light-activated system and can express Bglx gene to secrete β-glucosidase. |
The red/far-red light suicide control system REDMAP is so sensitive to light that as low as 0.1 mW∙cm-2 red light (far-red light) can be sensed. The specific mechanism of this system is that when exposed to red light (660 nm), the transactivator (FHY1–VP64) can specifically bind to the light sensor domain (ΔPhyA–Gal4) in the presence of the photosensitive pigment PCB. Then, the complex protein translocates into the nucleus where it can bind to its synthetic promoter (P5×UAS, 5×UAS-P(hCMVmin)) to initiate expression of MazF. Following exposure to far-red light (730 nm), the transactivator dissociates from the light sensor domain (ΔPhyA–Gal4), thereby terminating the expression of MazF. To make it more convenient for future teams to use our collection, we have made a detailed description of all parts on pages in Registry.
CDSs | Linker | Tag | Composite CDSs |
---|---|---|---|
BBa_K4211005 | BBa_K4211008 | BBa_K4211006 | BBa_K4211014 |
BBa_K4211007 | BBa_K4211010 | BBa_K4211015 | |
BBa_K4211009 | BBa_K4211012 | ||
BBa_K4211011 | |||
BBa_K4211013 |
The blue light cellulose degradation control system LightOn is so sensitive to light that as low as 15 W m-2 blue light can be sensed. The specific mechanism of this system is that when exposed to blue light (460 nm), the light sensor domain (Gal4(65)-VVD-p65 Activation Domain) can bind to its synthetic promoter (P5×UAS, 5×UAS(G)) to initiate expression of cellulase (Cex, CenA and Bglx).
The healing promoting module is used to promote wound healing and resistance to pathogens. The genes of skin growth factors EGF and bFGF were introduced into the plasmid pAAV6, and the engineered AAV infiltrated BJ cells so that BJ cells could secrete EGF and bFGF to promote skin wound healing. At the same time, the gene of human-derived antimicrobial peptide LL-37 was introduced into the plasmid pAAV6, and the engineered AAV infiltrated BJ cells, so that BJ cells could secrete LL-37 to protect against external pathogens.
CDSs | Composite CDSs |
---|---|
BBa_K4211000 | BBa_K4211003 |
BBa_K4211001 | BBa_K4211004 |
BBa_K4211002 |