Overview


Since BCAID comes from a multi-system design, the parts we've built to support the project are quite diverse, extraordinary and novel. Our parts are mainly concentrated in the healing promoting module, the blue light-activated cellulose degradation module and the red light-activated suicide module. We carefully submitted all the components we developed to perform one particular function into Basic Parts in Registry, then each basic part is combined with others orderly and meaningfully to compose functional Composite Parts, and finally submitted in Registry.

Basic Parts


Name Short Description Long Description
BBa_K4211000 EGF Epidermal growth factor (EGF) is a protein that stimulates cell growth and differentiation by binding to its receptor, EGFR.
BBa_K4211001 bFGF Basic fibroblast growth factor (bFGF or FGF2) has been found to be a multifunctional growth factor.
BBa_K4211002 IL-2 signal sequence The IL-2 Signal sequence is a secreted peptide sequence.
BBa_K4211005 5×UAS-P(hCMVmin) 5×UAS-P(hCMVmin) contains five tandem repeats of UAS upstream of a minimal CMV promoter to control expression of the downstream target genes.
BBa_K4211006 V5-tag The V5-tag is a polypeptide isolated from the P and V proteins of simian virus 5 (SV5), usually working as a protein tag.
BBa_K4211007 PhyA PhyA is a red/far-red light-responsive photoreceptor from the plant Arabidopsis thaliana.
BBa_K4211008 PhyA-Gal4 Linker PhyA-Gal4 Linker is a linker to link PhyA and Gal4.
BBa_K4211009 Gal4 The Gal4 transcription factor is a positive regulator of gene expression of galactose-induced genes.
BBa_K4211010 P2A P2A is a porcine teschovirus-1 derived self-cleavage 2A peptide and can cause co-translational cleavage of the encoded polypeptide.
BBa_K4211011 FHY1 FHY1, the shuttle protein far-red elongated hypocotyl 1, can rapidly bind PhyA under illumination with 660 nm light and can dissociate occurring at 730 nm.
BBa_K4211012 FHY1-VP64 Linker FHY1-VP64 Linker is a linker to link FHY1 and VP64.
BBa_K4211013 VP64 VP64, the herpes simplex virus-derived VP16 activation domain, is a kind of transcriptional activators.
BBa_K4211016 Cex Cex is used to cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain.
BBa_K4211017 CenA CenA is used to cut internal beta-1,4-glucosidic bonds.
BBa_K4211018 Bglx Bglx is used to hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.
BBa_K4211019 Gal4(65) The Gal4 transcription factor is a positive regulator of gene expression of galactose-induced genes.
BBa_K4211020 Gal4-VVD Linker Gal4(65)-VVD Linker is a linker to link Gal4(65) and VVD.
BBa_K4211021 VVD VVD, the smallest light-oxygen-voltage (LOV) domain–containing protein, forms a rapidly exchanging dimer upon blue-light activation.
BBa_K4211022 VVD-p65AD Linker VVD-p65AD Linker is a linker to link VVD and p65 Activation Domain.
BBa_K4211023 p65 Activation Domain p65 Activation Domain, known as GAVP, is a transactivator.
BBa_K4211024 p65AD-Flag Linker p65AD-Flag Linker is a linker to link p65AD and Flag.
BBa_K4211025 Flag Flag, known as DYKDDDDK tag, is a hydrophilic tag for recombinant protein technology.
BBa_K4211026 Pre LightOn promoter Pre LightOn promoter is a sequence in front of the 5×UAS(G) sequence.
BBa_K4211027 5×UAS(G) 5×UAS(G) can bind to Gal4(65) and activate downstream cellulase expression.
BBa_K4211028 5×UASG-TATA Linker 5×UAS(G)-TATA Linker is a linker to link 5×UAS(G) and TATA.
BBa_K4211029 TATA The TATA Box, Hogness Box, is one of the components that make up the eukaryotic promoter.
BBa_K4211030 Post LightOn Promoter Post LightOn promoter is a sequence behind the TATA sequence.
BBa_K4211031 CMV-Kozak Linker CMV-Kozak Linker is a linker to link CMV and Kozak.

Composite Parts


Name Short Description Long Description
BBa_K4211003 LL-37 secretion system To express LL-37 and secrete LL-37 out of the cell.
BBa_K4211004 bFGF secretion system To express bFGF and secrete bFGF out of the cell.
BBa_K4211014 REDMAP-GOI REDMAP-GOI system is a red light-activated system and can express the gene of interest.
BBa_K4211015 REDMAP-MazF REDMAP-MazF system is a red light-activated system and can express MazF to kill the engineered cells.
BBa_K4211032 LightOn-GOI LightOn-GOI system is a blue light-activated system and can express the gene of interest.
BBa_K4211053 LightOn-Cex LightOn-Cex system is a blue light-activated system and can express Cex gene to secrete exoglucanase.
BBa_K4211054 LightOn-CenA LightOn-CenA system is a blue light-activated system and can express CenA gene to secrete endoglucanase A.
BBa_K4211055 LightOn-Bglx LightOn-Bglx system is a blue light-activated system and can express Bglx gene to secrete β-glucosidase.

Red Light-activated Suicide Part Collection


The red/far-red light suicide control system REDMAP is so sensitive to light that as low as 0.1 mW∙cm-2 red light (far-red light) can be sensed. The specific mechanism of this system is that when exposed to red light (660 nm), the transactivator (FHY1–VP64) can specifically bind to the light sensor domain (ΔPhyA–Gal4) in the presence of the photosensitive pigment PCB. Then, the complex protein translocates into the nucleus where it can bind to its synthetic promoter (P5×UAS, 5×UAS-P(hCMVmin)) to initiate expression of MazF. Following exposure to far-red light (730 nm), the transactivator dissociates from the light sensor domain (ΔPhyA–Gal4), thereby terminating the expression of MazF. To make it more convenient for future teams to use our collection, we have made a detailed description of all parts on pages in Registry.

CDSs Linker Tag Composite CDSs
BBa_K4211005 BBa_K4211008 BBa_K4211006 BBa_K4211014
BBa_K4211007 BBa_K4211010 BBa_K4211015
BBa_K4211009 BBa_K4211012
BBa_K4211011
BBa_K4211013

Blue Light-activated Cellulose Degradation Part Collection


The blue light cellulose degradation control system LightOn is so sensitive to light that as low as 15 W m-2 blue light can be sensed. The specific mechanism of this system is that when exposed to blue light (460 nm), the light sensor domain (Gal4(65)-VVD-p65 Activation Domain) can bind to its synthetic promoter (P5×UAS, 5×UAS(G)) to initiate expression of cellulase (Cex, CenA and Bglx).

CDSs Linker Tag Composite CDSs
BBa_K4211016 BBa_K4211020 BBa_K4211025 BBa_K4211032
BBa_K4211017 BBa_K4211022 BBa_K4211053
BBa_K4211018 BBa_K4211024 BBa_K4211054
BBa_K4211019 BBa_K4211026 BBa_K4211055
BBa_K4211021 BBa_K4211028
BBa_K4211023 BBa_K4211030
BBa_K4211027 BBa_K4211031
BBa_K4211029

Healing Promoting Part Collection


The healing promoting module is used to promote wound healing and resistance to pathogens. The genes of skin growth factors EGF and bFGF were introduced into the plasmid pAAV6, and the engineered AAV infiltrated BJ cells so that BJ cells could secrete EGF and bFGF to promote skin wound healing. At the same time, the gene of human-derived antimicrobial peptide LL-37 was introduced into the plasmid pAAV6, and the engineered AAV infiltrated BJ cells, so that BJ cells could secrete LL-37 to protect against external pathogens.

CDSs Composite CDSs
BBa_K4211000 BBa_K4211003
BBa_K4211001 BBa_K4211004
BBa_K4211002