Week 1-2 (6.20~7.3)


Blue light induced Bacterial Cellulose(BC) degradation

Amplification culture and strain preservation of Cellulomonas fimi (CF).

Extract the whole genome DNA of CF.

Amplify the Cex and CenA genes of CF by PCR and amplify the signal peptide by PCR.

Detect Cex and CenA by agarose gel electrophoresis, extract PCR products Cex and CenA, and fusion of signal peptides and target fragments by Overlap PCR.

Adeno-associated virus (type 6, AAV6)

Extract AAV plasmids pHelper and pAAV6.

Amplify LL-37 and bFGF gene fragments synthesized by the company, identify PCR products by agarose gel electrophoresis, purify of PCR products.

BC

Expansion of Gluconacetobacter xylinum.

Week 3-4 (7.4~7.17)


Blue light induced BC degradation

Amplify the Cex and CenA genes of CF by PCR and amplify the signal peptide by PCR.

Detect Cex and CenA by agarose gel electrophoresis, extract PCR products Cex and CenA, and fusion of signal peptides and target fragments by Overlap PCR.

AAV

Extract AAV plasmids pHelper and pAAV6.

Amplify LL-37 and bFGF gene fragments synthesized by the company, identify PCR products by agarose gel electrophoresis, purify PCR products.

Double enzyme digestion of pAAV6 plasmid, agarose gel electrophoresis to detect the size of gene fragments, and cut agarose gel to extract gene fragments.

BC

Multi batch of BC film production, sterilization, and pretreatment before coculture.

Red light suicide system

Extract red light control plasmid REDMAP.

Week 5-6 (7.18~7.31)


AAV

Extract AAV plasmids pHelper and pAAV6.

Amplify LL-37 and bFGF gene fragments synthesized by the company, identify PCR products by agarose gel electrophoresis, purify PCR products.

Double enzyme digestion of pAAV6 plasmid, agarose gel electrophoresis to detect the size of gene fragments, and cut agarose gel to extract gene fragments.

Construct recombinant plasmid by ligating LL-37 and pAAV6 plasmid with T4 DNA ligase and construct recombinant plasmid by joining bFGF with pAAV6 plasmid by homologous recombination.

BC

Resuscitate fibroblast ATCC CRL-2522 (BJ), BGC823 cells, and HEK293T cells.

Coculture of three kinds of cells (BGC823, HEK293T, BJ) with BC membrane.

Red light suicide system

Extract lentivirus packaging plasmids psPAX2 and pMD2.G.

Week 7-8 (8.1~8.14)


Blue light induced BC degradation

Amplify Bglx gene fragments synthesized by the company, agarose gel electrophoresis to detect the size of gene fragments, and cut agarose gel to purify PCR products, fusion of signal peptides and target fragments by Overlap PCR.

Extract the blue light empty plasmid (PLVX) synthesized by the company.

AAV

Extract AAV plasmids pHelper and pAAV6.

Amplify LL-37 and bFGF gene fragments synthesized by the company, identify PCR products by agarose gel electrophoresis, purify PCR products.

Double enzyme digestion of pAAV6 plasmid, agarose gel electrophoresis to detect the size of gene fragments, and cut agarose gel to extract gene fragments.

Construct recombinant plasmid by ligating LL-37 and pAAV6 plasmid with T4 DNA ligase and construct recombinant plasmid by joining bFGF with pAAV6 plasmid by homologous recombination.

Red light suicide system

Extract lentivirus packaging plasmids psPAX2 and pMD2.G.

Transforming competent cells with psPAX2 and pMD2.G plasmids.

Week 9-10 (8.15~8.21)


Blue light induced BC degradation

Double enzyme digestion of PLVX and assembling three target gene (CexCenABglx) fragments with PLVX plasmid using homologous recombination to obtain three recombinant plasmids (PLVX-Cex, PLVX-CenA, PLVX-Bglx) of the Blue light system.

Sequencing and confirmation of the recombinant plasmids.

AAV

Amplify bFGF-6xHis gene fragment and extract plasmids (pAAV6-LL-37, pAAV6-EGF, and pAAV6-bFGF).

Red light suicide system

Transiently transfect recombinant plasmid into HEK293T and BGC823.

Proteinswere detected by SDS-PAGE electrophoresis, coomassie brilliant blue staining/ Western blot.

Week 11-13 (8.29~9.18)


Blue light induced BC degradation

Extract blue light controlled recombinant plasmids PLVX-Cex, PLVX-CenA, and PLVX-Bglx.

Transfect the recombinant plasmids into HEK293T.

Proteinswere detected by SDS-PAGE electrophoresis, coomassie brilliant blue staining/ Western blot.

Test blue light induced BC degradation.

AAV

pAAV6-LL-37/pAAV6-EGF/pAAV6-bFGF and pHelper plasmids were transfected into HEK293T cells to pack AAV.

Collect cells, split cells to obtain viruses, purify viruses, and verify packaging by qPCR.

ELISA validation of the expression of EGF/LL-37 in the cell culture supernatant.

Red light suicide system

Verify that red light induces cell suicide.

The MTT assay was used to verify the red light suicide system.

REDMAP, psPAX2, pMD2.G plasmids were transfected into cells to pack lentivirus.

qPCR validation of whether lentivirus was successfully produced.

Week 13-15 (9.19~10.3)


Blue light induced BC degradation

The recombinant plasmids were transfected into cells to pack lentivirus.

Collect virus supernatant.

Infection of HEK293T with virus supernatant.

Screening cells with puromycin.

Red light suicide system

Infect HEK293T and BGC823 with successfully packaged viruses.

Screening cells with G418.